Changes between Initial Version and Version 1 of DataManagement/SftpServer


Ignore:
Timestamp:
Jul 15, 2011 8:46:48 AM (14 years ago)
Author:
Morris Swertz
Comment:

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  • DataManagement/SftpServer

    v1 v1  
     1== UMCG SFTP (application20.target.rug.nl) ==
     2=== raw_data ===
     3Contains all the data coming from BGI, including their variant calls.
     4* /fastq
     5**  A4 trio fasta files
     6*/hg18
     7** Pilot snp, cnv, indel, stat files sent by BGI at the beginning of 2011
     8* /hg19
     9** A4 trio bam, snp, cnv files sent by BGI in April 2011
     10
     11=== resources ===
     12* GoNL resources tarball (Thanks Freerk!)
     13
     14=== results ===
     15Here is all the data that has gone through any kind processing at UMCG
     16*/bam/umcg/
     17** A4 trio complete bam files
     18** pilot chromosomes 19, 20, X, Y, MT bam files
     19* /snp/hg18
     20** Pilot cleaned up VCF files from the BGI on hg18(sorted, updated to VCF4.0)
     21* /snp/hg19
     22** Pilot initial unfiltered calls from UMCG
     23** Lifted-over files from BGI